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Cluster: SW054_bin.33_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_83819 k141_83819_16 21895 22863 + 1.A.34.1.3
TF k141_83819 k141_83819_17 22880 23227 + MerR
STP k141_83819 k141_83819_18 23298 25565 - HD
CAZyme k141_83819 k141_83819_19 25674 26906 - GH23
pfam k141_83819 k141_83819_20 26935 27726 - DUF5683
pfam k141_83819 k141_83819_21 27739 28635 - ParBc | HTH_ParB | ParB_dimer
TC k141_83819 k141_83819_22 28662 29426 - 8.A.3.2.3
pfam k141_83819 k141_83819_23 29680 30450 + SurE
CAZyme k141_83819 k141_83819_24 30452 31588 + GT19
pfam k141_83819 k141_83819_25 31689 32528 - CTP_transf_1
TC k141_83819 k141_83819_26 32531 34576 - 3.A.16.1.1
Gene ID: k141_83819_16
Type: TC
Location: 21895 - 22863 (+)
Gene ID: k141_83819_17
Type: TF
Location: 22880 - 23227 (+)
Gene ID: k141_83819_18
Type: STP
Location: 23298 - 25565 (-)
Gene ID: k141_83819_19
Type: CAZyme
Location: 25674 - 26906 (-)
Gene ID: k141_83819_20
Type: pfam
Location: 26935 - 27726 (-)
Gene ID: k141_83819_21
Type: pfam
Location: 27739 - 28635 (-)
Gene ID: k141_83819_22
Type: TC
Location: 28662 - 29426 (-)
Gene ID: k141_83819_23
Type: pfam
Location: 29680 - 30450 (+)
Gene ID: k141_83819_24
Type: CAZyme
Location: 30452 - 31588 (+)
Gene ID: k141_83819_25
Type: pfam
Location: 31689 - 32528 (-)
Gene ID: k141_83819_26
Type: TC
Location: 32531 - 34576 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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