Cluster: SW054_bin.33_CGC38
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: SW054_bin.33
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_138090 | k141_138090_3 | 2213 | 3316 | - | 9.B.169.1.1 |
| TC | k141_138090 | k141_138090_4 | 3557 | 4552 | + | 2.A.4.7.7 |
| pfam | k141_138090 | k141_138090_5 | 4664 | 4933 | + | Ribosomal_S15 |
| TF | k141_138090 | k141_138090_6 | 5015 | 5827 | - | HTH_AraC | HTH_AraC |
| CAZyme | k141_138090 | k141_138090_7 | 6008 | 8077 | + | GH29 |
| CAZyme | k141_138090 | k141_138090_8 | 8173 | 8949 | + | GH16_3 |
Gene ID: k141_138090_3
Type: TC
Location: 2213 - 3316 (-)
Type: TC
Location: 2213 - 3316 (-)
Gene ID: k141_138090_4
Type: TC
Location: 3557 - 4552 (+)
Type: TC
Location: 3557 - 4552 (+)
Gene ID: k141_138090_5
Type: pfam
Location: 4664 - 4933 (+)
Type: pfam
Location: 4664 - 4933 (+)
Gene ID: k141_138090_6
Type: TF
Location: 5015 - 5827 (-)
Type: TF
Location: 5015 - 5827 (-)
Gene ID: k141_138090_7
Type: CAZyme
Location: 6008 - 8077 (+)
Type: CAZyme
Location: 6008 - 8077 (+)
Gene ID: k141_138090_8
Type: CAZyme
Location: 8173 - 8949 (+)
Type: CAZyme
Location: 8173 - 8949 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola coprophilus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.