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Cluster: SW053_bin.14_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_139043 k141_139043_13 10894 11337 + 4.A.6.1.16
pfam k141_139043 k141_139043_14 11337 11618 + YajC
TC k141_139043 k141_139043_15 11655 12137 + 4.A.6.1.4
TC k141_139043 k141_139043_16 12228 13028 + 4.A.6.1.4
TC k141_139043 k141_139043_17 13018 14100 + 4.A.6.1.4
TF k141_139043 k141_139043_18 14285 15016 + GntR
STP k141_139043 k141_139043_19 15131 16297 + SIS | SIS
CAZyme k141_139043 k141_139043_20 16416 17585 + CE9
Gene ID: k141_139043_13
Type: TC
Location: 10894 - 11337 (+)
Gene ID: k141_139043_14
Type: pfam
Location: 11337 - 11618 (+)
Gene ID: k141_139043_15
Type: TC
Location: 11655 - 12137 (+)
Gene ID: k141_139043_16
Type: TC
Location: 12228 - 13028 (+)
Gene ID: k141_139043_17
Type: TC
Location: 13018 - 14100 (+)
Gene ID: k141_139043_18
Type: TF
Location: 14285 - 15016 (+)
Gene ID: k141_139043_19
Type: STP
Location: 15131 - 16297 (+)
Gene ID: k141_139043_20
Type: CAZyme
Location: 16416 - 17585 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_139043_14 vegan > omnivore 1.03263 0.00701

🧭 Explore Read Mapping of CGC

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