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Cluster: SW053_bin.14_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_140432 k141_140432_30 41594 42382 + 9.B.18.1.3
CAZyme k141_140432 k141_140432_31 42382 43602 + GT4
TC k141_140432 k141_140432_32 43595 44653 + 9.B.18.2.1
pfam k141_140432 k141_140432_33 44655 45872 + Epimerase | Polysacc_synt_C
pfam k141_140432 k141_140432_34 45877 47061 + Epimerase_2
CAZyme k141_140432 k141_140432_35 47061 48197 + GT4
pfam k141_140432 k141_140432_36 48170 48712 + Hexapep | Hexapep_2
CAZyme k141_140432 k141_140432_37 48722 49858 + GT4
pfam k141_140432 k141_140432_38 49855 51291 + O-ag_pol_Wzy
CAZyme k141_140432 k141_140432_39 51288 52316 + GT2
CAZyme k141_140432 k141_140432_40 52319 53299 + GT2
Gene ID: k141_140432_30
Type: TC
Location: 41594 - 42382 (+)
Gene ID: k141_140432_31
Type: CAZyme
Location: 42382 - 43602 (+)
Gene ID: k141_140432_32
Type: TC
Location: 43595 - 44653 (+)
Gene ID: k141_140432_33
Type: pfam
Location: 44655 - 45872 (+)
Gene ID: k141_140432_34
Type: pfam
Location: 45877 - 47061 (+)
Gene ID: k141_140432_35
Type: CAZyme
Location: 47061 - 48197 (+)
Gene ID: k141_140432_36
Type: pfam
Location: 48170 - 48712 (+)
Gene ID: k141_140432_37
Type: CAZyme
Location: 48722 - 49858 (+)
Gene ID: k141_140432_38
Type: pfam
Location: 49855 - 51291 (+)
Gene ID: k141_140432_39
Type: CAZyme
Location: 51288 - 52316 (+)
Gene ID: k141_140432_40
Type: CAZyme
Location: 52319 - 53299 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_140432_33 vegetarian > omnivore 1.44693 0.02575

🧭 Explore Read Mapping of CGC

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