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Cluster: SW053_bin.14_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_107663 k141_107663_1 1 1152 - 4.A.3.1.1
TF k141_107663 k141_107663_2 1428 2438 + LacI
TC k141_107663 k141_107663_3 2773 4533 - 4.A.3.1.1
CAZyme k141_107663 k141_107663_4 4710 6152 - GH1
TF k141_107663 k141_107663_5 6494 7531 + LacI
CAZyme k141_107663 k141_107663_6 7793 9232 - GH1
TC k141_107663 k141_107663_7 9299 11071 - 4.A.3.1.1
TF k141_107663 k141_107663_8 11428 12432 + LacI
TC k141_107663 k141_107663_9 12646 12984 + 4.A.3.1.2
Gene ID: k141_107663_1
Type: TC
Location: 1 - 1152 (-)
Gene ID: k141_107663_2
Type: TF
Location: 1428 - 2438 (+)
Gene ID: k141_107663_3
Type: TC
Location: 2773 - 4533 (-)
Gene ID: k141_107663_4
Type: CAZyme
Location: 4710 - 6152 (-)
Gene ID: k141_107663_5
Type: TF
Location: 6494 - 7531 (+)
Gene ID: k141_107663_6
Type: CAZyme
Location: 7793 - 9232 (-)
Gene ID: k141_107663_7
Type: TC
Location: 9299 - 11071 (-)
Gene ID: k141_107663_8
Type: TF
Location: 11428 - 12432 (+)
Gene ID: k141_107663_9
Type: TC
Location: 12646 - 12984 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_107663_5 vegetarian > omnivore 1.00294 0.02242

🧭 Explore Read Mapping of CGC

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