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Cluster: SW051_bin.45_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_112225 k141_112225_15 14975 16144 - CE9
STP k141_112225 k141_112225_16 16263 17429 - SIS | SIS
TF k141_112225 k141_112225_17 17544 18275 - GntR
TC k141_112225 k141_112225_18 18460 19542 - 4.A.6.1.4
TC k141_112225 k141_112225_19 19532 20332 - 4.A.6.1.4
TC k141_112225 k141_112225_20 20423 20905 - 4.A.6.1.4
pfam k141_112225 k141_112225_21 20942 21223 - YajC
TC k141_112225 k141_112225_22 21223 21666 - 4.A.6.1.16
Gene ID: k141_112225_15
Type: CAZyme
Location: 14975 - 16144 (-)
Gene ID: k141_112225_16
Type: STP
Location: 16263 - 17429 (-)
Gene ID: k141_112225_17
Type: TF
Location: 17544 - 18275 (-)
Gene ID: k141_112225_18
Type: TC
Location: 18460 - 19542 (-)
Gene ID: k141_112225_19
Type: TC
Location: 19532 - 20332 (-)
Gene ID: k141_112225_20
Type: TC
Location: 20423 - 20905 (-)
Gene ID: k141_112225_21
Type: pfam
Location: 20942 - 21223 (-)
Gene ID: k141_112225_22
Type: TC
Location: 21223 - 21666 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_112225_21 vegan > omnivore 1.11563 0.00863

🧭 Explore Read Mapping of CGC

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