Cluster: SW051_bin.45_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: SW051_bin.45
- CGC Family ID: CGCFAM_01372
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_170298 | k141_170298_7 | 5729 | 6931 | - | GT4 |
| pfam | k141_170298 | k141_170298_8 | 6928 | 7281 | - | Hexapep | Hexapep_2 |
| CAZyme | k141_170298 | k141_170298_9 | 7436 | 8686 | - | GT4 |
| CAZyme | k141_170298 | k141_170298_10 | 8687 | 9376 | - | GT4 |
| pfam | k141_170298 | k141_170298_11 | 9807 | 11159 | - | NTP_transferase | MannoseP_isomer | Cupin_2 |
| pfam | k141_170298 | k141_170298_12 | 11159 | 12868 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| TC | k141_170298 | k141_170298_13 | 12874 | 13539 | - | 9.B.18.1.2 |
Gene ID: k141_170298_7
Type: CAZyme
Location: 5729 - 6931 (-)
Type: CAZyme
Location: 5729 - 6931 (-)
Gene ID: k141_170298_8
Type: pfam
Location: 6928 - 7281 (-)
Type: pfam
Location: 6928 - 7281 (-)
Gene ID: k141_170298_9
Type: CAZyme
Location: 7436 - 8686 (-)
Type: CAZyme
Location: 7436 - 8686 (-)
Gene ID: k141_170298_10
Type: CAZyme
Location: 8687 - 9376 (-)
Type: CAZyme
Location: 8687 - 9376 (-)
Gene ID: k141_170298_11
Type: pfam
Location: 9807 - 11159 (-)
Type: pfam
Location: 9807 - 11159 (-)
Gene ID: k141_170298_12
Type: pfam
Location: 11159 - 12868 (-)
Type: pfam
Location: 11159 - 12868 (-)
Gene ID: k141_170298_13
Type: TC
Location: 12874 - 13539 (-)
Type: TC
Location: 12874 - 13539 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.