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Cluster: SW050_maxbin.002_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_17008 k141_17008_88 103202 103951 + 9.B.18.1.2
CAZyme k141_17008 k141_17008_89 103951 104727 + GT26
TC k141_17008 k141_17008_90 104728 105786 + 9.B.18.2.1
pfam k141_17008 k141_17008_91 105788 107005 + Epimerase | Polysacc_synt_C
pfam k141_17008 k141_17008_92 107010 108194 + Epimerase_2
CAZyme k141_17008 k141_17008_93 108194 109396 + GT4
pfam k141_17008 k141_17008_94 109396 109650 + Glycos_transf_1 | Glyco_trans_1_4
CAZyme k141_17008 k141_17008_95 109644 110759 + GT4
pfam k141_17008 k141_17008_96 110759 111949 + Wzy_C
CAZyme k141_17008 k141_17008_97 111949 112959 + GT2
Gene ID: k141_17008_88
Type: TC
Location: 103202 - 103951 (+)
Gene ID: k141_17008_89
Type: CAZyme
Location: 103951 - 104727 (+)
Gene ID: k141_17008_90
Type: TC
Location: 104728 - 105786 (+)
Gene ID: k141_17008_91
Type: pfam
Location: 105788 - 107005 (+)
Gene ID: k141_17008_92
Type: pfam
Location: 107010 - 108194 (+)
Gene ID: k141_17008_93
Type: CAZyme
Location: 108194 - 109396 (+)
Gene ID: k141_17008_94
Type: pfam
Location: 109396 - 109650 (+)
Gene ID: k141_17008_95
Type: CAZyme
Location: 109644 - 110759 (+)
Gene ID: k141_17008_96
Type: pfam
Location: 110759 - 111949 (+)
Gene ID: k141_17008_97
Type: CAZyme
Location: 111949 - 112959 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_17008_91 vegetarian > omnivore 1.36188 0.03991
k141_17008_91 vegetarian > vegan 1.68810 0.01421

🧭 Explore Read Mapping of CGC

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