Cluster: SW050_maxbin.002_CGC10
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: SW050_maxbin.002
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_209700 | k141_209700_35 | 30249 | 32072 | - | GH13_30 |
| STP | k141_209700 | k141_209700_36 | 32754 | 33500 | - | STAS |
| STP | k141_209700 | k141_209700_37 | 33579 | 35924 | - | GAF | SpoIIE |
| TC | k141_209700 | k141_209700_38 | 36670 | 37698 | - | 3.A.1.5.36 |
| TC | k141_209700 | k141_209700_39 | 37699 | 38790 | - | 3.A.1.5.34 |
| TC | k141_209700 | k141_209700_40 | 38793 | 39728 | - | 3.A.1.5.11 |
| TC | k141_209700 | k141_209700_41 | 39743 | 40780 | - | 3.A.1.5.37 |
| TC | k141_209700 | k141_209700_42 | 40936 | 42612 | - | 3.A.1.5.35 |
Gene ID: k141_209700_35
Type: CAZyme
Location: 30249 - 32072 (-)
Type: CAZyme
Location: 30249 - 32072 (-)
Gene ID: k141_209700_36
Type: STP
Location: 32754 - 33500 (-)
Type: STP
Location: 32754 - 33500 (-)
Gene ID: k141_209700_37
Type: STP
Location: 33579 - 35924 (-)
Type: STP
Location: 33579 - 35924 (-)
Gene ID: k141_209700_38
Type: TC
Location: 36670 - 37698 (-)
Type: TC
Location: 36670 - 37698 (-)
Gene ID: k141_209700_39
Type: TC
Location: 37699 - 38790 (-)
Type: TC
Location: 37699 - 38790 (-)
Gene ID: k141_209700_40
Type: TC
Location: 38793 - 39728 (-)
Type: TC
Location: 38793 - 39728 (-)
Gene ID: k141_209700_41
Type: TC
Location: 39743 - 40780 (-)
Type: TC
Location: 39743 - 40780 (-)
Gene ID: k141_209700_42
Type: TC
Location: 40936 - 42612 (-)
Type: TC
Location: 40936 - 42612 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.