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Cluster: SW048_bin.2_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_116114 k141_116114_11 13061 14443 - GH4
TC k141_116114 k141_116114_12 14447 16063 - 4.A.1.1.3
pfam k141_116114 k141_116114_13 16163 17029 - PRD | PRD | CAT_RBD
TC k141_116114 k141_116114_14 17036 17548 - 4.A.1.2.11
TC k141_116114 k141_116114_15 17998 20262 - 1.I.1.1.3
STP k141_116114 k141_116114_16 20780 21742 + FHA
STP k141_116114 k141_116114_17 21914 23998 + Pkinase
TC k141_116114 k141_116114_18 24328 26670 + 3.A.3.5.15
Gene ID: k141_116114_11
Type: CAZyme
Location: 13061 - 14443 (-)
Gene ID: k141_116114_12
Type: TC
Location: 14447 - 16063 (-)
Gene ID: k141_116114_13
Type: pfam
Location: 16163 - 17029 (-)
Gene ID: k141_116114_14
Type: TC
Location: 17036 - 17548 (-)
Gene ID: k141_116114_15
Type: TC
Location: 17998 - 20262 (-)
Gene ID: k141_116114_16
Type: STP
Location: 20780 - 21742 (+)
Gene ID: k141_116114_17
Type: STP
Location: 21914 - 23998 (+)
Gene ID: k141_116114_18
Type: TC
Location: 24328 - 26670 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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