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Cluster: SW048_14_sub_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_87581 k141_87581_6 4594 5412 + GT5
pfam k141_87581 k141_87581_7 5441 7024 + DUF4270
CAZyme k141_87581 k141_87581_8 7108 8523 - GH57
CAZyme k141_87581 k141_87581_9 8541 9809 - GT4
CAZyme k141_87581 k141_87581_10 9824 11764 - GH133
NULL(UNKNOWN) k141_87581 k141_87581_11 11801 11917 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_87581 k141_87581_12 11935 12645 + 9.B.104.3.2
Gene ID: k141_87581_6
Type: CAZyme
Location: 4594 - 5412 (+)
Gene ID: k141_87581_7
Type: pfam
Location: 5441 - 7024 (+)
Gene ID: k141_87581_8
Type: CAZyme
Location: 7108 - 8523 (-)
Gene ID: k141_87581_9
Type: CAZyme
Location: 8541 - 9809 (-)
Gene ID: k141_87581_10
Type: CAZyme
Location: 9824 - 11764 (-)
Gene ID: k141_87581_11
Type:
Location: 11801 - 11917 (+)
Gene ID: k141_87581_12
Type: TC
Location: 11935 - 12645 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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