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Cluster: SW046_bin.20_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_77227 k141_77227_12 13274 14656 - GH4
TC k141_77227 k141_77227_13 14660 16276 - 4.A.1.1.3
pfam k141_77227 k141_77227_14 16376 17242 - PRD | PRD | CAT_RBD
TC k141_77227 k141_77227_15 17249 17761 - 4.A.1.2.2
STP k141_77227 k141_77227_16 18042 18803 - Fer4
TC k141_77227 k141_77227_17 19422 21623 - 1.I.1.1.3
STP k141_77227 k141_77227_18 22222 23184 + FHA
STP k141_77227 k141_77227_19 23356 25440 + Pkinase
TC k141_77227 k141_77227_20 25771 28110 + 3.A.3.5.15
Gene ID: k141_77227_12
Type: CAZyme
Location: 13274 - 14656 (-)
Gene ID: k141_77227_13
Type: TC
Location: 14660 - 16276 (-)
Gene ID: k141_77227_14
Type: pfam
Location: 16376 - 17242 (-)
Gene ID: k141_77227_15
Type: TC
Location: 17249 - 17761 (-)
Gene ID: k141_77227_16
Type: STP
Location: 18042 - 18803 (-)
Gene ID: k141_77227_17
Type: TC
Location: 19422 - 21623 (-)
Gene ID: k141_77227_18
Type: STP
Location: 22222 - 23184 (+)
Gene ID: k141_77227_19
Type: STP
Location: 23356 - 25440 (+)
Gene ID: k141_77227_20
Type: TC
Location: 25771 - 28110 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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