Cluster: SW046_bin.20_CGC17
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: SW046_bin.20
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_56680 | k141_56680_2 | 324 | 1829 | + | GH77 |
| CAZyme | k141_56680 | k141_56680_3 | 1959 | 4226 | + | GT35 |
| TC | k141_56680 | k141_56680_4 | 4683 | 5882 | - | 3.A.1.1.22 |
| TC | k141_56680 | k141_56680_5 | 5951 | 6790 | - | 3.A.1.1.45 |
| TC | k141_56680 | k141_56680_6 | 6790 | 7644 | - | 3.A.1.1.45 |
| TC | k141_56680 | k141_56680_7 | 7732 | 9048 | - | 3.A.1.1.45 |
| TF | k141_56680 | k141_56680_8 | 9355 | 10074 | - | GntR |
| TC | k141_56680 | k141_56680_9 | 10299 | 12749 | + | 4.A.1.1.8 |
Gene ID: k141_56680_2
Type: CAZyme
Location: 324 - 1829 (+)
Type: CAZyme
Location: 324 - 1829 (+)
Gene ID: k141_56680_3
Type: CAZyme
Location: 1959 - 4226 (+)
Type: CAZyme
Location: 1959 - 4226 (+)
Gene ID: k141_56680_4
Type: TC
Location: 4683 - 5882 (-)
Type: TC
Location: 4683 - 5882 (-)
Gene ID: k141_56680_5
Type: TC
Location: 5951 - 6790 (-)
Type: TC
Location: 5951 - 6790 (-)
Gene ID: k141_56680_6
Type: TC
Location: 6790 - 7644 (-)
Type: TC
Location: 6790 - 7644 (-)
Gene ID: k141_56680_7
Type: TC
Location: 7732 - 9048 (-)
Type: TC
Location: 7732 - 9048 (-)
Gene ID: k141_56680_8
Type: TF
Location: 9355 - 10074 (-)
Type: TF
Location: 9355 - 10074 (-)
Gene ID: k141_56680_9
Type: TC
Location: 10299 - 12749 (+)
Type: TC
Location: 10299 - 12749 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.