Cluster: SW046_bin.20_CGC16
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: SW046_bin.20
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_17850 | k141_17850_67 | 81034 | 81360 | + | 4.A.3.2.7 |
| TC | k141_17850 | k141_17850_68 | 81407 | 81700 | + | 4.A.3.2.6 |
| TC | k141_17850 | k141_17850_69 | 81710 | 83059 | + | 4.A.3.2.6 |
| CAZyme | k141_17850 | k141_17850_70 | 83061 | 84515 | + | GH1 |
| pfam | k141_17850 | k141_17850_71 | 84968 | 86098 | - | Peptidase_C70 | Peptidase_C39_2 |
| TC | k141_17850 | k141_17850_72 | 86296 | 87774 | - | 2.A.118.1.1 |
| pfam | k141_17850 | k141_17850_73 | 88206 | 89213 | - | 2-Hacid_dh | 2-Hacid_dh_C |
| pfam | k141_17850 | k141_17850_74 | 89335 | 90192 | - | ADI | ADI | DDAH_eukar |
| TC | k141_17850 | k141_17850_75 | 90305 | 91822 | - | 2.A.118.1.6 |
Gene ID: k141_17850_67
Type: TC
Location: 81034 - 81360 (+)
Type: TC
Location: 81034 - 81360 (+)
Gene ID: k141_17850_68
Type: TC
Location: 81407 - 81700 (+)
Type: TC
Location: 81407 - 81700 (+)
Gene ID: k141_17850_69
Type: TC
Location: 81710 - 83059 (+)
Type: TC
Location: 81710 - 83059 (+)
Gene ID: k141_17850_70
Type: CAZyme
Location: 83061 - 84515 (+)
Type: CAZyme
Location: 83061 - 84515 (+)
Gene ID: k141_17850_71
Type: pfam
Location: 84968 - 86098 (-)
Type: pfam
Location: 84968 - 86098 (-)
Gene ID: k141_17850_72
Type: TC
Location: 86296 - 87774 (-)
Type: TC
Location: 86296 - 87774 (-)
Gene ID: k141_17850_73
Type: pfam
Location: 88206 - 89213 (-)
Type: pfam
Location: 88206 - 89213 (-)
Gene ID: k141_17850_74
Type: pfam
Location: 89335 - 90192 (-)
Type: pfam
Location: 89335 - 90192 (-)
Gene ID: k141_17850_75
Type: TC
Location: 90305 - 91822 (-)
Type: TC
Location: 90305 - 91822 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_17850_67 | vegetarian > vegan | 1.44085 | 0.03962 |
| k141_17850_68 | vegetarian > vegan | 2.20783 | 0.03962 |
| k141_17850_69 | vegetarian > vegan | 1.94847 | 0.03962 |
| k141_17850_70 | vegetarian > vegan | 2.05421 | 0.03962 |