Cluster: SW044_maxbin.002_CGC3
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: SW044_maxbin.002
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_45177 | k141_45177_92 | 105296 | 105739 | + | 4.A.6.1.16 |
| pfam | k141_45177 | k141_45177_93 | 105739 | 106020 | + | YajC |
| TC | k141_45177 | k141_45177_94 | 106057 | 106539 | + | 4.A.6.1.4 |
| TC | k141_45177 | k141_45177_95 | 106630 | 107430 | + | 4.A.6.1.4 |
| TC | k141_45177 | k141_45177_96 | 107420 | 108502 | + | 4.A.6.1.4 |
| TF | k141_45177 | k141_45177_97 | 108687 | 109418 | + | GntR |
| STP | k141_45177 | k141_45177_98 | 109533 | 110699 | + | SIS | SIS |
| CAZyme | k141_45177 | k141_45177_99 | 110817 | 111986 | + | CE9 |
Gene ID: k141_45177_92
Type: TC
Location: 105296 - 105739 (+)
Type: TC
Location: 105296 - 105739 (+)
Gene ID: k141_45177_93
Type: pfam
Location: 105739 - 106020 (+)
Type: pfam
Location: 105739 - 106020 (+)
Gene ID: k141_45177_94
Type: TC
Location: 106057 - 106539 (+)
Type: TC
Location: 106057 - 106539 (+)
Gene ID: k141_45177_95
Type: TC
Location: 106630 - 107430 (+)
Type: TC
Location: 106630 - 107430 (+)
Gene ID: k141_45177_96
Type: TC
Location: 107420 - 108502 (+)
Type: TC
Location: 107420 - 108502 (+)
Gene ID: k141_45177_97
Type: TF
Location: 108687 - 109418 (+)
Type: TF
Location: 108687 - 109418 (+)
Gene ID: k141_45177_98
Type: STP
Location: 109533 - 110699 (+)
Type: STP
Location: 109533 - 110699 (+)
Gene ID: k141_45177_99
Type: CAZyme
Location: 110817 - 111986 (+)
Type: CAZyme
Location: 110817 - 111986 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.