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Cluster: SW044_maxbin.002_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_70381 k141_70381_69 70140 71066 - CE7
TC k141_70381 k141_70381_70 71198 72025 - 3.A.1.5.27
TC k141_70381 k141_70381_71 72026 74041 - 3.A.1.5.25
TC k141_70381 k141_70381_72 74045 75001 - 3.A.1.5.38
TC k141_70381 k141_70381_73 75157 76770 - 3.A.1.5.27
pfam k141_70381 k141_70381_74 77136 79076 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC k141_70381 k141_70381_75 79083 81386 - 2.A.66.4.4
pfam k141_70381 k141_70381_76 81390 81890 - tRNA_edit
pfam k141_70381 k141_70381_77 82024 84903 - UvrA_DNA-bind | UvrA_inter
TC k141_70381 k141_70381_78 85163 85993 + 3.A.1.132.3
Gene ID: k141_70381_69
Type: CAZyme
Location: 70140 - 71066 (-)
Gene ID: k141_70381_70
Type: TC
Location: 71198 - 72025 (-)
Gene ID: k141_70381_71
Type: TC
Location: 72026 - 74041 (-)
Gene ID: k141_70381_72
Type: TC
Location: 74045 - 75001 (-)
Gene ID: k141_70381_73
Type: TC
Location: 75157 - 76770 (-)
Gene ID: k141_70381_74
Type: pfam
Location: 77136 - 79076 (-)
Gene ID: k141_70381_75
Type: TC
Location: 79083 - 81386 (-)
Gene ID: k141_70381_76
Type: pfam
Location: 81390 - 81890 (-)
Gene ID: k141_70381_77
Type: pfam
Location: 82024 - 84903 (-)
Gene ID: k141_70381_78
Type: TC
Location: 85163 - 85993 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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