Cluster: SW040_maxbin.033_CGC8
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: SW040_maxbin.033
- CGC Family ID: CGCFAM_06235
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_121668 | k141_121668_60 | 61716 | 62405 | - | 2.A.64.1.3 |
| pfam | k141_121668 | k141_121668_61 | 62395 | 62634 | - | TatA_B_E |
| STP | k141_121668 | k141_121668_62 | 62770 | 63273 | - | Nitroreductase | Nitroreductase |
| TC | k141_121668 | k141_121668_63 | 63688 | 65073 | - | 2.A.25.1.4 |
| pfam | k141_121668 | k141_121668_64 | 65403 | 66167 | - | SurE |
| CAZyme | k141_121668 | k141_121668_65 | 66177 | 67427 | - | GT2 |
| pfam | k141_121668 | k141_121668_66 | 67450 | 68127 | - | CDP-OH_P_transf |
| pfam | k141_121668 | k141_121668_67 | 68124 | 68762 | - | PS_Dcarbxylase |
| CAZyme | k141_121668 | k141_121668_68 | 68776 | 69507 | - | GT26 |
| pfam | k141_121668 | k141_121668_69 | 69632 | 71665 | - | DEAD | Helicase_C | tRNA_anti-codon | ResIII | RecG_wedge | RecG_dom3_C |
| pfam | k141_121668 | k141_121668_70 | 71801 | 71992 | + | Ribosomal_L28 |
| TC | k141_121668 | k141_121668_71 | 72352 | 73728 | + | 2.A.3.3.22 |
Gene ID: k141_121668_60
Type: TC
Location: 61716 - 62405 (-)
Type: TC
Location: 61716 - 62405 (-)
Gene ID: k141_121668_61
Type: pfam
Location: 62395 - 62634 (-)
Type: pfam
Location: 62395 - 62634 (-)
Gene ID: k141_121668_62
Type: STP
Location: 62770 - 63273 (-)
Type: STP
Location: 62770 - 63273 (-)
Gene ID: k141_121668_63
Type: TC
Location: 63688 - 65073 (-)
Type: TC
Location: 63688 - 65073 (-)
Gene ID: k141_121668_64
Type: pfam
Location: 65403 - 66167 (-)
Type: pfam
Location: 65403 - 66167 (-)
Gene ID: k141_121668_65
Type: CAZyme
Location: 66177 - 67427 (-)
Type: CAZyme
Location: 66177 - 67427 (-)
Gene ID: k141_121668_66
Type: pfam
Location: 67450 - 68127 (-)
Type: pfam
Location: 67450 - 68127 (-)
Gene ID: k141_121668_67
Type: pfam
Location: 68124 - 68762 (-)
Type: pfam
Location: 68124 - 68762 (-)
Gene ID: k141_121668_68
Type: CAZyme
Location: 68776 - 69507 (-)
Type: CAZyme
Location: 68776 - 69507 (-)
Gene ID: k141_121668_69
Type: pfam
Location: 69632 - 71665 (-)
Type: pfam
Location: 69632 - 71665 (-)
Gene ID: k141_121668_70
Type: pfam
Location: 71801 - 71992 (+)
Type: pfam
Location: 71801 - 71992 (+)
Gene ID: k141_121668_71
Type: TC
Location: 72352 - 73728 (+)
Type: TC
Location: 72352 - 73728 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.