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Cluster: SW034_81_sub_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_52781 k141_52781_75 86021 86890 + 3.A.1.3.1
TC k141_52781 k141_52781_76 86977 87633 + 3.A.1.3.5
TC k141_52781 k141_52781_77 87649 88407 + 3.A.1.3.15
pfam k141_52781 k141_52781_78 88483 89412 + Epimerase
pfam k141_52781 k141_52781_79 89426 90202 + AP_endonuc_2
CAZyme k141_52781 k141_52781_80 90199 91005 + GT2
pfam k141_52781 k141_52781_81 91020 93095 + PMT_2
pfam k141_52781 k141_52781_82 93114 94238 + DAO
CAZyme k141_52781 k141_52781_83 94231 95172 + GT2
Gene ID: k141_52781_75
Type: TC
Location: 86021 - 86890 (+)
Gene ID: k141_52781_76
Type: TC
Location: 86977 - 87633 (+)
Gene ID: k141_52781_77
Type: TC
Location: 87649 - 88407 (+)
Gene ID: k141_52781_78
Type: pfam
Location: 88483 - 89412 (+)
Gene ID: k141_52781_79
Type: pfam
Location: 89426 - 90202 (+)
Gene ID: k141_52781_80
Type: CAZyme
Location: 90199 - 91005 (+)
Gene ID: k141_52781_81
Type: pfam
Location: 91020 - 93095 (+)
Gene ID: k141_52781_82
Type: pfam
Location: 93114 - 94238 (+)
Gene ID: k141_52781_83
Type: CAZyme
Location: 94231 - 95172 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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