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Cluster: SW034_81_sub_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_52781 k141_52781_25 27469 28998 - 9.A.11.1.2
pfam k141_52781 k141_52781_26 29176 29853 + DUF421
pfam k141_52781 k141_52781_27 29850 30233 + DUF4363
CAZyme k141_52781 k141_52781_28 30483 32336 + CBM26
CAZyme k141_52781 k141_52781_29 32354 34723 + GH13_42
CAZyme k141_52781 k141_52781_30 34861 37110 + GH13_42
Gene ID: k141_52781_25
Type: TC
Location: 27469 - 28998 (-)
Gene ID: k141_52781_26
Type: pfam
Location: 29176 - 29853 (+)
Gene ID: k141_52781_27
Type: pfam
Location: 29850 - 30233 (+)
Gene ID: k141_52781_28
Type: CAZyme
Location: 30483 - 32336 (+)
Gene ID: k141_52781_29
Type: CAZyme
Location: 32354 - 34723 (+)
Gene ID: k141_52781_30
Type: CAZyme
Location: 34861 - 37110 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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