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Cluster: SW034_81_sub_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_83744 k141_83744_57 60235 61104 + 3.A.1.7.5
TC k141_83744 k141_83744_58 61097 62002 + 3.A.1.7.5
TC k141_83744 k141_83744_59 62012 62761 + 3.A.1.7.5
pfam k141_83744 k141_83744_60 62761 63429 + PhoU | PhoU
pfam k141_83744 k141_83744_61 63754 65763 - VanW
CAZyme k141_83744 k141_83744_62 66071 67210 + GT28
TC k141_83744 k141_83744_63 67344 68480 + 4.D.2.1.5
CAZyme k141_83744 k141_83744_64 68520 69539 + GT2
Gene ID: k141_83744_57
Type: TC
Location: 60235 - 61104 (+)
Gene ID: k141_83744_58
Type: TC
Location: 61097 - 62002 (+)
Gene ID: k141_83744_59
Type: TC
Location: 62012 - 62761 (+)
Gene ID: k141_83744_60
Type: pfam
Location: 62761 - 63429 (+)
Gene ID: k141_83744_61
Type: pfam
Location: 63754 - 65763 (-)
Gene ID: k141_83744_62
Type: CAZyme
Location: 66071 - 67210 (+)
Gene ID: k141_83744_63
Type: TC
Location: 67344 - 68480 (+)
Gene ID: k141_83744_64
Type: CAZyme
Location: 68520 - 69539 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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