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Cluster: SW034_81_sub_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_37959 k141_37959_18 22341 23138 - CE4
pfam k141_37959 k141_37959_19 23280 24857 - Big_2 | Big_2 | Big_2 | Big_2 | Hydrolase_2
TC k141_37959 k141_37959_20 25172 26908 - 3.A.1.135.5
TC k141_37959 k141_37959_21 26905 28635 - 3.A.1.135.5
TC k141_37959 k141_37959_22 28920 30458 + 2.A.66.2.17
STP k141_37959 k141_37959_23 30749 32302 - HD
pfam k141_37959 k141_37959_24 32957 33985 + Gp_dh_N | Gp_dh_C
TC k141_37959 k141_37959_25 34099 35748 - 4.C.1.1.6
Gene ID: k141_37959_18
Type: CAZyme
Location: 22341 - 23138 (-)
Gene ID: k141_37959_19
Type: pfam
Location: 23280 - 24857 (-)
Gene ID: k141_37959_20
Type: TC
Location: 25172 - 26908 (-)
Gene ID: k141_37959_21
Type: TC
Location: 26905 - 28635 (-)
Gene ID: k141_37959_22
Type: TC
Location: 28920 - 30458 (+)
Gene ID: k141_37959_23
Type: STP
Location: 30749 - 32302 (-)
Gene ID: k141_37959_24
Type: pfam
Location: 32957 - 33985 (+)
Gene ID: k141_37959_25
Type: TC
Location: 34099 - 35748 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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