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Cluster: SW030_bin.4_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_35253 k141_35253_3 2181 3863 + 2.A.66.4.4
pfam k141_35253 k141_35253_4 3870 5810 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC k141_35253 k141_35253_5 6176 7789 + 3.A.1.5.27
TC k141_35253 k141_35253_6 7945 8901 + 3.A.1.5.38
TC k141_35253 k141_35253_7 8905 10920 + 3.A.1.5.25
TC k141_35253 k141_35253_8 10921 11748 + 3.A.1.5.27
CAZyme k141_35253 k141_35253_9 11880 12806 + CE7
Gene ID: k141_35253_3
Type: TC
Location: 2181 - 3863 (+)
Gene ID: k141_35253_4
Type: pfam
Location: 3870 - 5810 (+)
Gene ID: k141_35253_5
Type: TC
Location: 6176 - 7789 (+)
Gene ID: k141_35253_6
Type: TC
Location: 7945 - 8901 (+)
Gene ID: k141_35253_7
Type: TC
Location: 8905 - 10920 (+)
Gene ID: k141_35253_8
Type: TC
Location: 10921 - 11748 (+)
Gene ID: k141_35253_9
Type: CAZyme
Location: 11880 - 12806 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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