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Cluster: SW030_bin.4_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_92271 k141_92271_2 756 2261 + GH77
CAZyme k141_92271 k141_92271_3 2390 4657 + GT35
TC k141_92271 k141_92271_4 5034 6233 - 3.A.1.1.22
TC k141_92271 k141_92271_5 6302 7141 - 3.A.1.1.45
TC k141_92271 k141_92271_6 7141 7995 - 3.A.1.1.45
TC k141_92271 k141_92271_7 8083 9399 - 3.A.1.1.45
TF k141_92271 k141_92271_8 9706 10425 - GntR
NULL(UNKNOWN) k141_92271 k141_92271_9 10509 10628 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_92271 k141_92271_10 10650 13100 + 4.A.1.1.8
Gene ID: k141_92271_2
Type: CAZyme
Location: 756 - 2261 (+)
Gene ID: k141_92271_3
Type: CAZyme
Location: 2390 - 4657 (+)
Gene ID: k141_92271_4
Type: TC
Location: 5034 - 6233 (-)
Gene ID: k141_92271_5
Type: TC
Location: 6302 - 7141 (-)
Gene ID: k141_92271_6
Type: TC
Location: 7141 - 7995 (-)
Gene ID: k141_92271_7
Type: TC
Location: 8083 - 9399 (-)
Gene ID: k141_92271_8
Type: TF
Location: 9706 - 10425 (-)
Gene ID: k141_92271_9
Type:
Location: 10509 - 10628 (-)
Gene ID: k141_92271_10
Type: TC
Location: 10650 - 13100 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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