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Cluster: SW030_bin.4_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_291794 k141_291794_9 7626 9047 - GH1
TC k141_291794 k141_291794_10 9123 10880 - 4.A.3.1.1
TF k141_291794 k141_291794_11 11156 12166 + LacI
TC k141_291794 k141_291794_12 12502 14262 - 4.A.3.1.1
CAZyme k141_291794 k141_291794_13 14439 15881 - GH1
TF k141_291794 k141_291794_14 16223 17260 + LacI
CAZyme k141_291794 k141_291794_15 17522 18961 - GH1
TC k141_291794 k141_291794_16 19154 20929 - 4.A.3.1.1
TF k141_291794 k141_291794_17 21287 22291 + LacI
TC k141_291794 k141_291794_18 22506 22844 + 4.A.3.1.2
Gene ID: k141_291794_9
Type: CAZyme
Location: 7626 - 9047 (-)
Gene ID: k141_291794_10
Type: TC
Location: 9123 - 10880 (-)
Gene ID: k141_291794_11
Type: TF
Location: 11156 - 12166 (+)
Gene ID: k141_291794_12
Type: TC
Location: 12502 - 14262 (-)
Gene ID: k141_291794_13
Type: CAZyme
Location: 14439 - 15881 (-)
Gene ID: k141_291794_14
Type: TF
Location: 16223 - 17260 (+)
Gene ID: k141_291794_15
Type: CAZyme
Location: 17522 - 18961 (-)
Gene ID: k141_291794_16
Type: TC
Location: 19154 - 20929 (-)
Gene ID: k141_291794_17
Type: TF
Location: 21287 - 22291 (+)
Gene ID: k141_291794_18
Type: TC
Location: 22506 - 22844 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_291794_14 vegetarian > omnivore 1.00422 0.02677

🧭 Explore Read Mapping of CGC

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