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Cluster: SW028_35_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_164071 k141_164071_43 48778 52260 - GH13_39
TC k141_164071 k141_164071_44 52442 53998 - 1.B.23.1.18
pfam k141_164071 k141_164071_45 54262 55038 - Hydrolase_3
CAZyme k141_164071 k141_164071_46 55051 56715 - GH13_31
TC k141_164071 k141_164071_47 56806 58926 - 4.A.1.1.8
TF k141_164071 k141_164071_48 59202 59996 - HTH_6
pfam k141_164071 k141_164071_49 60119 61060 - Mem_trans | Mem_trans
TC k141_164071 k141_164071_50 61196 62647 - 2.A.38.1.1
TC k141_164071 k141_164071_51 62695 64173 - 2.A.38.1.1
TC k141_164071 k141_164071_52 64187 65539 - 2.A.38.1.1
Gene ID: k141_164071_43
Type: CAZyme
Location: 48778 - 52260 (-)
Gene ID: k141_164071_44
Type: TC
Location: 52442 - 53998 (-)
Gene ID: k141_164071_45
Type: pfam
Location: 54262 - 55038 (-)
Gene ID: k141_164071_46
Type: CAZyme
Location: 55051 - 56715 (-)
Gene ID: k141_164071_47
Type: TC
Location: 56806 - 58926 (-)
Gene ID: k141_164071_48
Type: TF
Location: 59202 - 59996 (-)
Gene ID: k141_164071_49
Type: pfam
Location: 60119 - 61060 (-)
Gene ID: k141_164071_50
Type: TC
Location: 61196 - 62647 (-)
Gene ID: k141_164071_51
Type: TC
Location: 62695 - 64173 (-)
Gene ID: k141_164071_52
Type: TC
Location: 64187 - 65539 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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