dbCAN Logo

Cluster: SW028_35_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_164071 k141_164071_21 22228 25272 - 2.A.6.2.17
TC k141_164071 k141_164071_22 25269 26351 - 2.A.6.2.27
TF k141_164071 k141_164071_23 26338 26832 - MarR
pfam k141_164071 k141_164071_24 27109 27954 + VitK2_biosynth
CAZyme k141_164071 k141_164071_25 28000 29118 + GH3
TC k141_164071 k141_164071_26 29198 30571 - 2.A.22.5.3
TC k141_164071 k141_164071_27 30737 32449 - 8.A.7.1.1
TC k141_164071 k141_164071_28 32579 32845 - 8.A.8.1.6
TF k141_164071 k141_164071_29 33124 34800 - 0037176
TC k141_164071 k141_164071_30 35342 36691 + 2.A.1.14.3
pfam k141_164071 k141_164071_31 36796 37230 - Flavodoxin_1
pfam k141_164071 k141_164071_32 37304 37903 - DUF3793
TC k141_164071 k141_164071_33 38122 39183 + 3.A.1.24.1
TC k141_164071 k141_164071_34 39152 39805 + 3.A.1.24.5
TC k141_164071 k141_164071_35 39901 40743 + 3.A.1.24.5
Gene ID: k141_164071_21
Type: TC
Location: 22228 - 25272 (-)
Gene ID: k141_164071_22
Type: TC
Location: 25269 - 26351 (-)
Gene ID: k141_164071_23
Type: TF
Location: 26338 - 26832 (-)
Gene ID: k141_164071_24
Type: pfam
Location: 27109 - 27954 (+)
Gene ID: k141_164071_25
Type: CAZyme
Location: 28000 - 29118 (+)
Gene ID: k141_164071_26
Type: TC
Location: 29198 - 30571 (-)
Gene ID: k141_164071_27
Type: TC
Location: 30737 - 32449 (-)
Gene ID: k141_164071_28
Type: TC
Location: 32579 - 32845 (-)
Gene ID: k141_164071_29
Type: TF
Location: 33124 - 34800 (-)
Gene ID: k141_164071_30
Type: TC
Location: 35342 - 36691 (+)
Gene ID: k141_164071_31
Type: pfam
Location: 36796 - 37230 (-)
Gene ID: k141_164071_32
Type: pfam
Location: 37304 - 37903 (-)
Gene ID: k141_164071_33
Type: TC
Location: 38122 - 39183 (+)
Gene ID: k141_164071_34
Type: TC
Location: 39152 - 39805 (+)
Gene ID: k141_164071_35
Type: TC
Location: 39901 - 40743 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List