Cluster: SW028_35_CGC20
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 1
- Substrate:
- Genome ID: SW028_35
- CGC Family ID: CGCFAM_03415
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_309367 | k141_309367_22 | 19003 | 19509 | + | 3.D.1.1.1 |
| TC | k141_309367 | k141_309367_23 | 19526 | 20779 | + | 3.D.1.5.1 |
| TC | k141_309367 | k141_309367_24 | 20776 | 22533 | + | 3.D.1.6.1 |
| TC | k141_309367 | k141_309367_25 | 22534 | 22962 | - | 2.A.7.2.2 |
| pfam | k141_309367 | k141_309367_26 | 23416 | 24423 | + | tRNA-synt_1b |
| TC | k141_309367 | k141_309367_27 | 24509 | 25381 | - | 3.D.10.1.4 |
| pfam | k141_309367 | k141_309367_28 | 25385 | 26332 | - | Fer4_7 | Fer2_3 | Fer4_8 | Fer4_9 | Fer4_17 |
| TC | k141_309367 | k141_309367_29 | 26335 | 28185 | - | 3.D.10.1.4 |
| TF | k141_309367 | k141_309367_30 | 28349 | 29257 | - | HTH_1 |
| pfam | k141_309367 | k141_309367_31 | 29268 | 30296 | - | Asparaginase | Asparaginase_C |
| TC | k141_309367 | k141_309367_32 | 30498 | 31457 | - | 2.A.28.2.4 |
| TF | k141_309367 | k141_309367_33 | 31650 | 32495 | + | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | k141_309367 | k141_309367_34 | 32501 | 33118 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_309367 | k141_309367_35 | 33324 | 35564 | - | GH36 |
| pfam | k141_309367 | k141_309367_36 | 35683 | 36543 | - | S6PP | Hydrolase_3 |
| pfam | k141_309367 | k141_309367_37 | 36612 | 36989 | - | YgbA_NO |
| TC | k141_309367 | k141_309367_38 | 37257 | 38585 | - | 2.A.26.1.1 |
Gene ID: k141_309367_22
Type: TC
Location: 19003 - 19509 (+)
Type: TC
Location: 19003 - 19509 (+)
Gene ID: k141_309367_23
Type: TC
Location: 19526 - 20779 (+)
Type: TC
Location: 19526 - 20779 (+)
Gene ID: k141_309367_24
Type: TC
Location: 20776 - 22533 (+)
Type: TC
Location: 20776 - 22533 (+)
Gene ID: k141_309367_25
Type: TC
Location: 22534 - 22962 (-)
Type: TC
Location: 22534 - 22962 (-)
Gene ID: k141_309367_26
Type: pfam
Location: 23416 - 24423 (+)
Type: pfam
Location: 23416 - 24423 (+)
Gene ID: k141_309367_27
Type: TC
Location: 24509 - 25381 (-)
Type: TC
Location: 24509 - 25381 (-)
Gene ID: k141_309367_28
Type: pfam
Location: 25385 - 26332 (-)
Type: pfam
Location: 25385 - 26332 (-)
Gene ID: k141_309367_29
Type: TC
Location: 26335 - 28185 (-)
Type: TC
Location: 26335 - 28185 (-)
Gene ID: k141_309367_30
Type: TF
Location: 28349 - 29257 (-)
Type: TF
Location: 28349 - 29257 (-)
Gene ID: k141_309367_31
Type: pfam
Location: 29268 - 30296 (-)
Type: pfam
Location: 29268 - 30296 (-)
Gene ID: k141_309367_32
Type: TC
Location: 30498 - 31457 (-)
Type: TC
Location: 30498 - 31457 (-)
Gene ID: k141_309367_33
Type: TF
Location: 31650 - 32495 (+)
Type: TF
Location: 31650 - 32495 (+)
Gene ID: k141_309367_34
Type:
Location: 32501 - 33118 (-)
Type:
Location: 32501 - 33118 (-)
Gene ID: k141_309367_35
Type: CAZyme
Location: 33324 - 35564 (-)
Type: CAZyme
Location: 33324 - 35564 (-)
Gene ID: k141_309367_36
Type: pfam
Location: 35683 - 36543 (-)
Type: pfam
Location: 35683 - 36543 (-)
Gene ID: k141_309367_37
Type: pfam
Location: 36612 - 36989 (-)
Type: pfam
Location: 36612 - 36989 (-)
Gene ID: k141_309367_38
Type: TC
Location: 37257 - 38585 (-)
Type: TC
Location: 37257 - 38585 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Mitsuokella
Species
Mitsuokella sp900552565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.