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Cluster: SW026_45_sub_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_108380 k141_108380_118 137774 138841 - CE7
CAZyme k141_108380 k141_108380_119 138843 139817 - CE7
TC k141_108380 k141_108380_120 140017 140838 - 3.A.1.5.10
TC k141_108380 k141_108380_121 140839 142893 - 3.A.1.5.35
TC k141_108380 k141_108380_122 142896 143852 - 3.A.1.5.38
TC k141_108380 k141_108380_123 143979 145574 - 3.A.1.5.27
Gene ID: k141_108380_118
Type: CAZyme
Location: 137774 - 138841 (-)
Gene ID: k141_108380_119
Type: CAZyme
Location: 138843 - 139817 (-)
Gene ID: k141_108380_120
Type: TC
Location: 140017 - 140838 (-)
Gene ID: k141_108380_121
Type: TC
Location: 140839 - 142893 (-)
Gene ID: k141_108380_122
Type: TC
Location: 142896 - 143852 (-)
Gene ID: k141_108380_123
Type: TC
Location: 143979 - 145574 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_108380_122 vegan > omnivore 1.22606 0.01057

🧭 Explore Read Mapping of CGC

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