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Cluster: SW026_45_sub_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_66539 k141_66539_25 32352 33515 + CE9
pfam k141_66539 k141_66539_26 34043 35122 + OTCace | OTCace_N
TC k141_66539 k141_66539_27 35255 36685 + 2.A.3.7.7
pfam k141_66539 k141_66539_28 36853 38067 + PAD_porph | PAD_porph
TC k141_66539 k141_66539_29 38200 39672 + 2.A.3.7.7
pfam k141_66539 k141_66539_30 39849 41072 + Glyco_trans_2_3 | Glyco_tranf_2_3
TC k141_66539 k141_66539_31 41069 42421 + 9.B.33.1.1
TF k141_66539 k141_66539_32 42481 43218 + LytTR
pfam k141_66539 k141_66539_33 43312 43785 + Metallophos | Metallophos_2
TC k141_66539 k141_66539_34 43833 44543 - 9.B.105.2.2
Gene ID: k141_66539_25
Type: CAZyme
Location: 32352 - 33515 (+)
Gene ID: k141_66539_26
Type: pfam
Location: 34043 - 35122 (+)
Gene ID: k141_66539_27
Type: TC
Location: 35255 - 36685 (+)
Gene ID: k141_66539_28
Type: pfam
Location: 36853 - 38067 (+)
Gene ID: k141_66539_29
Type: TC
Location: 38200 - 39672 (+)
Gene ID: k141_66539_30
Type: pfam
Location: 39849 - 41072 (+)
Gene ID: k141_66539_31
Type: TC
Location: 41069 - 42421 (+)
Gene ID: k141_66539_32
Type: TF
Location: 42481 - 43218 (+)
Gene ID: k141_66539_33
Type: pfam
Location: 43312 - 43785 (+)
Gene ID: k141_66539_34
Type: TC
Location: 43833 - 44543 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_66539_28 vegan > omnivore 1.45065 0.01057

🧭 Explore Read Mapping of CGC

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