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Cluster: SW026_45_sub_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_16078 k141_16078_20 25040 27052 + 4.A.1.2.13
CAZyme k141_16078 k141_16078_21 27216 28910 + GH13_29
TC k141_16078 k141_16078_22 29161 30123 + 3.A.1.34.1
TC k141_16078 k141_16078_23 30242 31159 + 3.A.1.34.1
TC k141_16078 k141_16078_24 31159 31953 + 3.A.1.34.1
pfam k141_16078 k141_16078_25 32285 33145 - S6PP | Hydrolase_3
TC k141_16078 k141_16078_26 33291 33950 - 3.A.3.1.8
TC k141_16078 k141_16078_27 33960 34613 - 3.A.3.1.8
TC k141_16078 k141_16078_28 34620 37487 - 3.A.3.1.8
Gene ID: k141_16078_20
Type: TC
Location: 25040 - 27052 (+)
Gene ID: k141_16078_21
Type: CAZyme
Location: 27216 - 28910 (+)
Gene ID: k141_16078_22
Type: TC
Location: 29161 - 30123 (+)
Gene ID: k141_16078_23
Type: TC
Location: 30242 - 31159 (+)
Gene ID: k141_16078_24
Type: TC
Location: 31159 - 31953 (+)
Gene ID: k141_16078_25
Type: pfam
Location: 32285 - 33145 (-)
Gene ID: k141_16078_26
Type: TC
Location: 33291 - 33950 (-)
Gene ID: k141_16078_27
Type: TC
Location: 33960 - 34613 (-)
Gene ID: k141_16078_28
Type: TC
Location: 34620 - 37487 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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