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Cluster: SW026_10_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_19266 k141_19266_86 80998 82710 - GT2
TC k141_19266 k141_19266_87 83023 83712 + 9.B.27.1.1
pfam k141_19266 k141_19266_88 83705 84694 + CCG | Fer4_8
pfam k141_19266 k141_19266_89 84726 85799 + APH
TC k141_19266 k141_19266_90 85909 87324 - 2.A.22.5.3
STP k141_19266 k141_19266_91 87746 88312 + TetR_N
NULL(UNKNOWN) k141_19266 k141_19266_92 88450 89502 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_19266 k141_19266_93 89991 91793 + 2.A.58.2.2
TC k141_19266 k141_19266_94 91918 92937 + 9.B.157.1.1
Gene ID: k141_19266_86
Type: CAZyme
Location: 80998 - 82710 (-)
Gene ID: k141_19266_87
Type: TC
Location: 83023 - 83712 (+)
Gene ID: k141_19266_88
Type: pfam
Location: 83705 - 84694 (+)
Gene ID: k141_19266_89
Type: pfam
Location: 84726 - 85799 (+)
Gene ID: k141_19266_90
Type: TC
Location: 85909 - 87324 (-)
Gene ID: k141_19266_91
Type: STP
Location: 87746 - 88312 (+)
Gene ID: k141_19266_92
Type:
Location: 88450 - 89502 (+)
Gene ID: k141_19266_93
Type: TC
Location: 89991 - 91793 (+)
Gene ID: k141_19266_94
Type: TC
Location: 91918 - 92937 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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