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Cluster: SW026_10_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_114641 k141_114641_9 9614 10483 + 3.A.1.1.41
TC k141_114641 k141_114641_10 10483 11334 + 3.A.1.1.46
pfam k141_114641 k141_114641_11 11345 12169 + NAT_N | GNAT_C
TC k141_114641 k141_114641_12 12190 13275 - 3.A.1.1.22
pfam k141_114641 k141_114641_13 13430 14473 + URO-D
STP k141_114641 k141_114641_14 14606 15916 + SBP_bac_1
TC k141_114641 k141_114641_15 15993 16877 + 3.A.1.1.20
TC k141_114641 k141_114641_16 16891 17700 + 3.A.1.1.36
CAZyme k141_114641 k141_114641_17 17723 19375 + GH123
STP k141_114641 k141_114641_18 19826 21016 + Aminotran_1_2
TC k141_114641 k141_114641_19 21058 22431 + 2.A.26.1.5
Gene ID: k141_114641_9
Type: TC
Location: 9614 - 10483 (+)
Gene ID: k141_114641_10
Type: TC
Location: 10483 - 11334 (+)
Gene ID: k141_114641_11
Type: pfam
Location: 11345 - 12169 (+)
Gene ID: k141_114641_12
Type: TC
Location: 12190 - 13275 (-)
Gene ID: k141_114641_13
Type: pfam
Location: 13430 - 14473 (+)
Gene ID: k141_114641_14
Type: STP
Location: 14606 - 15916 (+)
Gene ID: k141_114641_15
Type: TC
Location: 15993 - 16877 (+)
Gene ID: k141_114641_16
Type: TC
Location: 16891 - 17700 (+)
Gene ID: k141_114641_17
Type: CAZyme
Location: 17723 - 19375 (+)
Gene ID: k141_114641_18
Type: STP
Location: 19826 - 21016 (+)
Gene ID: k141_114641_19
Type: TC
Location: 21058 - 22431 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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