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Cluster: SW026_10_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_29688 k141_29688_17 20304 21605 + 2.A.66.1.32
TF k141_29688 k141_29688_18 21855 22226 + GntR
TC k141_29688 k141_29688_19 22231 22929 + 3.A.1.132.6
NULL(UNKNOWN) k141_29688 k141_29688_20 22923 23723 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_29688 k141_29688_21 23938 26550 - GT35
CAZyme k141_29688 k141_29688_22 26679 28712 - GT5
CAZyme k141_29688 k141_29688_23 28966 31041 + CBM48 | GH13_9
pfam k141_29688 k141_29688_24 31093 32301 + NTP_transferase | Hexapep_GlmU
pfam k141_29688 k141_29688_25 32315 33436 + NTP_transferase | Hexapep_GlmU
CAZyme k141_29688 k141_29688_26 33455 37072 + GH13_39
CAZyme k141_29688 k141_29688_27 37082 38644 - GH77
Gene ID: k141_29688_17
Type: TC
Location: 20304 - 21605 (+)
Gene ID: k141_29688_18
Type: TF
Location: 21855 - 22226 (+)
Gene ID: k141_29688_19
Type: TC
Location: 22231 - 22929 (+)
Gene ID: k141_29688_20
Type:
Location: 22923 - 23723 (+)
Gene ID: k141_29688_21
Type: CAZyme
Location: 23938 - 26550 (-)
Gene ID: k141_29688_22
Type: CAZyme
Location: 26679 - 28712 (-)
Gene ID: k141_29688_23
Type: CAZyme
Location: 28966 - 31041 (+)
Gene ID: k141_29688_24
Type: pfam
Location: 31093 - 32301 (+)
Gene ID: k141_29688_25
Type: pfam
Location: 32315 - 33436 (+)
Gene ID: k141_29688_26
Type: CAZyme
Location: 33455 - 37072 (+)
Gene ID: k141_29688_27
Type: CAZyme
Location: 37082 - 38644 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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