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Cluster: SW025_103_sub_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_193117 k141_193117_13 11563 13068 + GH77
CAZyme k141_193117 k141_193117_14 13198 15465 + GT35
TC k141_193117 k141_193117_15 15922 17121 - 3.A.1.1.22
TC k141_193117 k141_193117_16 17190 18029 - 3.A.1.1.45
TC k141_193117 k141_193117_17 18029 18883 - 3.A.1.1.45
TC k141_193117 k141_193117_18 18971 20287 - 3.A.1.1.45
TF k141_193117 k141_193117_19 20594 21313 - GntR
NULL(UNKNOWN) k141_193117 k141_193117_20 21397 21516 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_193117 k141_193117_21 21538 23988 + 4.A.1.1.8
Gene ID: k141_193117_13
Type: CAZyme
Location: 11563 - 13068 (+)
Gene ID: k141_193117_14
Type: CAZyme
Location: 13198 - 15465 (+)
Gene ID: k141_193117_15
Type: TC
Location: 15922 - 17121 (-)
Gene ID: k141_193117_16
Type: TC
Location: 17190 - 18029 (-)
Gene ID: k141_193117_17
Type: TC
Location: 18029 - 18883 (-)
Gene ID: k141_193117_18
Type: TC
Location: 18971 - 20287 (-)
Gene ID: k141_193117_19
Type: TF
Location: 20594 - 21313 (-)
Gene ID: k141_193117_20
Type:
Location: 21397 - 21516 (-)
Gene ID: k141_193117_21
Type: TC
Location: 21538 - 23988 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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