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Cluster: SW025_103_sub_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_152450 k141_152450_10 13672 15354 + 2.A.66.4.4
pfam k141_152450 k141_152450_11 15361 17301 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC k141_152450 k141_152450_12 17666 19279 + 3.A.1.5.27
TC k141_152450 k141_152450_13 19435 20391 + 3.A.1.5.38
TC k141_152450 k141_152450_14 20395 22410 + 3.A.1.5.25
TC k141_152450 k141_152450_15 22411 23238 + 3.A.1.5.27
CAZyme k141_152450 k141_152450_16 23370 24296 + CE7
Gene ID: k141_152450_10
Type: TC
Location: 13672 - 15354 (+)
Gene ID: k141_152450_11
Type: pfam
Location: 15361 - 17301 (+)
Gene ID: k141_152450_12
Type: TC
Location: 17666 - 19279 (+)
Gene ID: k141_152450_13
Type: TC
Location: 19435 - 20391 (+)
Gene ID: k141_152450_14
Type: TC
Location: 20395 - 22410 (+)
Gene ID: k141_152450_15
Type: TC
Location: 22411 - 23238 (+)
Gene ID: k141_152450_16
Type: CAZyme
Location: 23370 - 24296 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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