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Cluster: SW023_bin.36_sub_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_108631 k141_108631_1 136 1008 + 3.A.1.1.29
STP k141_108631 k141_108631_2 1073 2626 + SBP_bac_1
CAZyme k141_108631 k141_108631_3 2723 3676 + GT108
TF k141_108631 k141_108631_4 3831 5738 + HTH_AraC
pfam k141_108631 k141_108631_5 5781 6782 - SpoVAD
TC k141_108631 k141_108631_6 6817 7269 - 9.A.11.1.1
NULL(UNKNOWN) k141_108631 k141_108631_7 7492 8205 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_108631 k141_108631_8 8574 8783 - Fer2_BFD
TC k141_108631 k141_108631_9 8881 10806 - 3.A.1.135.5
TC k141_108631 k141_108631_10 10790 12535 - 3.A.1.135.5
Gene ID: k141_108631_1
Type: TC
Location: 136 - 1008 (+)
Gene ID: k141_108631_2
Type: STP
Location: 1073 - 2626 (+)
Gene ID: k141_108631_3
Type: CAZyme
Location: 2723 - 3676 (+)
Gene ID: k141_108631_4
Type: TF
Location: 3831 - 5738 (+)
Gene ID: k141_108631_5
Type: pfam
Location: 5781 - 6782 (-)
Gene ID: k141_108631_6
Type: TC
Location: 6817 - 7269 (-)
Gene ID: k141_108631_7
Type:
Location: 7492 - 8205 (-)
Gene ID: k141_108631_8
Type: pfam
Location: 8574 - 8783 (-)
Gene ID: k141_108631_9
Type: TC
Location: 8881 - 10806 (-)
Gene ID: k141_108631_10
Type: TC
Location: 10790 - 12535 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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