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Cluster: SW023_bin.36_sub_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_65817 k141_65817_76 80934 82061 - GH179
pfam k141_65817 k141_65817_77 82154 83041 - AP_endonuc_2
pfam k141_65817 k141_65817_78 83061 84182 - GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme k141_65817 k141_65817_79 84218 85315 - GH179
TF k141_65817 k141_65817_80 85495 87066 - HTH_AraC | HTH_AraC
TC k141_65817 k141_65817_81 87059 88831 - 8.A.59.2.1
Gene ID: k141_65817_76
Type: CAZyme
Location: 80934 - 82061 (-)
Gene ID: k141_65817_77
Type: pfam
Location: 82154 - 83041 (-)
Gene ID: k141_65817_78
Type: pfam
Location: 83061 - 84182 (-)
Gene ID: k141_65817_79
Type: CAZyme
Location: 84218 - 85315 (-)
Gene ID: k141_65817_80
Type: TF
Location: 85495 - 87066 (-)
Gene ID: k141_65817_81
Type: TC
Location: 87059 - 88831 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_65817_76 vegetarian > vegan 2.22016 0.00639
k141_65817_77 vegetarian > vegan 3.03152 0.00639
k141_65817_78 vegetarian > vegan 1.96379 0.00639
k141_65817_79 vegetarian > vegan 1.56133 0.00639
k141_65817_81 vegetarian > vegan 1.75431 0.00639

🧭 Explore Read Mapping of CGC

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