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Cluster: SW023_bin.36_sub_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_82504 k141_82504_91 94679 95140 + 8.A.42.1.6
STP k141_82504 k141_82504_92 95459 96163 + TetR_N
pfam k141_82504 k141_82504_93 96160 101052 + Flg_new
CAZyme k141_82504 k141_82504_94 101708 102631 - GH25
Gene ID: k141_82504_91
Type: TC
Location: 94679 - 95140 (+)
Gene ID: k141_82504_92
Type: STP
Location: 95459 - 96163 (+)
Gene ID: k141_82504_93
Type: pfam
Location: 96160 - 101052 (+)
Gene ID: k141_82504_94
Type: CAZyme
Location: 101708 - 102631 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_82504_92 vegan > omnivore 1.20758 0.01560

🧭 Explore Read Mapping of CGC

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