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Cluster: SW022_67_sub_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_138444 k141_138444_3 3071 4060 + GH130_2
STP k141_138444 k141_138444_4 4309 4962 - AraC_binding
pfam k141_138444 k141_138444_5 5127 7523 - Big_2
CAZyme k141_138444 k141_138444_6 7544 9490 - GH163
NULL(UNKNOWN) k141_138444 k141_138444_7 9500 12454 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_138444 k141_138444_8 12456 13361 - 3.A.1.1.41
pfam k141_138444 k141_138444_9 13364 14275 - BPD_transp_1
NULL(UNKNOWN) k141_138444 k141_138444_10 14296 15984 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_138444 k141_138444_11 16387 17112 + 3.A.1.1.38
Gene ID: k141_138444_3
Type: CAZyme
Location: 3071 - 4060 (+)
Gene ID: k141_138444_4
Type: STP
Location: 4309 - 4962 (-)
Gene ID: k141_138444_5
Type: pfam
Location: 5127 - 7523 (-)
Gene ID: k141_138444_6
Type: CAZyme
Location: 7544 - 9490 (-)
Gene ID: k141_138444_7
Type:
Location: 9500 - 12454 (-)
Gene ID: k141_138444_8
Type: TC
Location: 12456 - 13361 (-)
Gene ID: k141_138444_9
Type: pfam
Location: 13364 - 14275 (-)
Gene ID: k141_138444_10
Type:
Location: 14296 - 15984 (-)
Gene ID: k141_138444_11
Type: TC
Location: 16387 - 17112 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-826
→
Genus
UBA4951
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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