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Cluster: SW019_115_sub_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_241125 k141_241125_20 19103 19735 + 9.B.18.1.2
pfam k141_241125 k141_241125_21 19722 20915 + Orn_Arg_deC_N
pfam k141_241125 k141_241125_22 20919 21896 + ATP-grasp_3 | Dala_Dala_lig_C | ATPgrasp_Ter | PylC-like_N
CAZyme k141_241125 k141_241125_23 21957 23060 + GT4
CAZyme k141_241125 k141_241125_24 23072 24202 + GT4
pfam k141_241125 k141_241125_25 24193 24741 + Hexapep
CAZyme k141_241125 k141_241125_26 24754 25638 + GT2
pfam k141_241125 k141_241125_27 25669 26859 + Wzy_C
pfam k141_241125 k141_241125_28 26919 27629 + Hexapep | Hexapep_2
TC k141_241125 k141_241125_29 27649 29088 + 2.A.66.2.16
Gene ID: k141_241125_20
Type: TC
Location: 19103 - 19735 (+)
Gene ID: k141_241125_21
Type: pfam
Location: 19722 - 20915 (+)
Gene ID: k141_241125_22
Type: pfam
Location: 20919 - 21896 (+)
Gene ID: k141_241125_23
Type: CAZyme
Location: 21957 - 23060 (+)
Gene ID: k141_241125_24
Type: CAZyme
Location: 23072 - 24202 (+)
Gene ID: k141_241125_25
Type: pfam
Location: 24193 - 24741 (+)
Gene ID: k141_241125_26
Type: CAZyme
Location: 24754 - 25638 (+)
Gene ID: k141_241125_27
Type: pfam
Location: 25669 - 26859 (+)
Gene ID: k141_241125_28
Type: pfam
Location: 26919 - 27629 (+)
Gene ID: k141_241125_29
Type: TC
Location: 27649 - 29088 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
UMGS1449
→
Species
UMGS1449 sp934087515

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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