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Cluster: SW017_31_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_66685 k141_66685_19 18247 19182 + 3.A.5.1.1
STP k141_66685 k141_66685_20 19184 20401 + ACT | PALP
CAZyme k141_66685 k141_66685_21 20744 22924 + CBM48 | GH13_9
pfam k141_66685 k141_66685_22 22941 24125 + NTP_transferase | Hexapep_GlmU
pfam k141_66685 k141_66685_23 24139 25272 + NTP_transferase | Hexapep_GlmU
CAZyme k141_66685 k141_66685_24 25265 26710 + GT5
CAZyme k141_66685 k141_66685_25 26773 29211 + GT35
CAZyme k141_66685 k141_66685_26 29239 31161 + GH13_39
Gene ID: k141_66685_19
Type: TC
Location: 18247 - 19182 (+)
Gene ID: k141_66685_20
Type: STP
Location: 19184 - 20401 (+)
Gene ID: k141_66685_21
Type: CAZyme
Location: 20744 - 22924 (+)
Gene ID: k141_66685_22
Type: pfam
Location: 22941 - 24125 (+)
Gene ID: k141_66685_23
Type: pfam
Location: 24139 - 25272 (+)
Gene ID: k141_66685_24
Type: CAZyme
Location: 25265 - 26710 (+)
Gene ID: k141_66685_25
Type: CAZyme
Location: 26773 - 29211 (+)
Gene ID: k141_66685_26
Type: CAZyme
Location: 29239 - 31161 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_66685_25 vegan > omnivore 1.02056 0.00305

🧭 Explore Read Mapping of CGC

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