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Cluster: SW017_31_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_9436 k141_9436_3 2178 2921 - 2.A.102.3.1
pfam k141_9436 k141_9436_4 3050 4150 - Phage_integrase
TC k141_9436 k141_9436_5 4329 5570 + 2.A.55.2.6
pfam k141_9436 k141_9436_6 5617 7479 + AAA_15 | AAA_21
pfam k141_9436 k141_9436_7 7580 8143 + Adenine_glyco
CAZyme k141_9436 k141_9436_8 8287 9495 + GH73
pfam k141_9436 k141_9436_9 9927 11852 + tRNA-synt_2b | TGS | HGTP_anticodon | tRNA_SAD
pfam k141_9436 k141_9436_10 12150 12458 + Trns_repr_metal
TC k141_9436 k141_9436_11 12489 15032 + 3.A.3.5.15
TC k141_9436 k141_9436_12 15261 17606 + 9.A.8.1.6
Gene ID: k141_9436_3
Type: TC
Location: 2178 - 2921 (-)
Gene ID: k141_9436_4
Type: pfam
Location: 3050 - 4150 (-)
Gene ID: k141_9436_5
Type: TC
Location: 4329 - 5570 (+)
Gene ID: k141_9436_6
Type: pfam
Location: 5617 - 7479 (+)
Gene ID: k141_9436_7
Type: pfam
Location: 7580 - 8143 (+)
Gene ID: k141_9436_8
Type: CAZyme
Location: 8287 - 9495 (+)
Gene ID: k141_9436_9
Type: pfam
Location: 9927 - 11852 (+)
Gene ID: k141_9436_10
Type: pfam
Location: 12150 - 12458 (+)
Gene ID: k141_9436_11
Type: TC
Location: 12489 - 15032 (+)
Gene ID: k141_9436_12
Type: TC
Location: 15261 - 17606 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_9436_10 vegan > omnivore 1.54260 0.00305

🧭 Explore Read Mapping of CGC

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