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Cluster: SW017_31_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_69359 k141_69359_74 77509 79449 - 2.A.67.4.2
NULL(UNKNOWN) k141_69359 k141_69359_75 79729 80637 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_69359 k141_69359_76 81175 81819 + MatE | MatE
CAZyme k141_69359 k141_69359_77 82119 83993 - GT5
pfam k141_69359 k141_69359_78 84194 84394 - DUF6487
TC k141_69359 k141_69359_79 84513 85109 - 2.A.115.2.14
Gene ID: k141_69359_74
Type: TC
Location: 77509 - 79449 (-)
Gene ID: k141_69359_75
Type:
Location: 79729 - 80637 (-)
Gene ID: k141_69359_76
Type: pfam
Location: 81175 - 81819 (+)
Gene ID: k141_69359_77
Type: CAZyme
Location: 82119 - 83993 (-)
Gene ID: k141_69359_78
Type: pfam
Location: 84194 - 84394 (-)
Gene ID: k141_69359_79
Type: TC
Location: 84513 - 85109 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_69359_77 vegan > omnivore 1.43332 0.00305
k141_69359_78 vegan > omnivore 1.13870 0.00305
k141_69359_79 vegan > omnivore 1.07316 0.00305
k141_69359_79 vegetarian > omnivore 2.14482 0.00037
k141_69359_79 vegetarian > vegan 1.07167 0.01287

🧭 Explore Read Mapping of CGC

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