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Cluster: SW017_31_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_53349 k141_53349_89 92303 93505 + GH3
STP k141_53349 k141_53349_90 93607 95034 + Pribosyltran
pfam k141_53349 k141_53349_91 95051 96481 + Lyase_1 | ADSL_C
TC k141_53349 k141_53349_92 96660 98012 + 9.B.18.2.1
STP k141_53349 k141_53349_93 98030 99163 + Aminotran_1_2
TC k141_53349 k141_53349_94 99194 101437 + 9.B.18.1.1
pfam k141_53349 k141_53349_95 101430 102098 + PglD_N
CAZyme k141_53349 k141_53349_96 102088 103182 + GT4
pfam k141_53349 k141_53349_97 103201 104310 + EpsG
CAZyme k141_53349 k141_53349_98 104337 105320 + GT2
CAZyme k141_53349 k141_53349_99 105339 106229 + GT2
CAZyme k141_53349 k141_53349_100 106233 107378 + GT4
pfam k141_53349 k141_53349_101 107397 107939 + Hexapep | Hexapep_2
CAZyme k141_53349 k141_53349_102 107945 108937 + GT2
CAZyme k141_53349 k141_53349_103 108941 109912 + GT2
pfam k141_53349 k141_53349_104 109925 111013 + PS_pyruv_trans
CAZyme k141_53349 k141_53349_105 111025 111981 + GT2
pfam k141_53349 k141_53349_106 111947 113116 + Glyco_transf_61
CAZyme k141_53349 k141_53349_107 113121 114125 + GT32
CAZyme k141_53349 k141_53349_108 114112 115086 + GT2
pfam k141_53349 k141_53349_109 115096 116616 + Polysacc_synt | Polysacc_synt_3
CAZyme k141_53349 k141_53349_110 116638 117729 + GT2
Gene ID: k141_53349_89
Type: CAZyme
Location: 92303 - 93505 (+)
Gene ID: k141_53349_90
Type: STP
Location: 93607 - 95034 (+)
Gene ID: k141_53349_91
Type: pfam
Location: 95051 - 96481 (+)
Gene ID: k141_53349_92
Type: TC
Location: 96660 - 98012 (+)
Gene ID: k141_53349_93
Type: STP
Location: 98030 - 99163 (+)
Gene ID: k141_53349_94
Type: TC
Location: 99194 - 101437 (+)
Gene ID: k141_53349_95
Type: pfam
Location: 101430 - 102098 (+)
Gene ID: k141_53349_96
Type: CAZyme
Location: 102088 - 103182 (+)
Gene ID: k141_53349_97
Type: pfam
Location: 103201 - 104310 (+)
Gene ID: k141_53349_98
Type: CAZyme
Location: 104337 - 105320 (+)
Gene ID: k141_53349_99
Type: CAZyme
Location: 105339 - 106229 (+)
Gene ID: k141_53349_100
Type: CAZyme
Location: 106233 - 107378 (+)
Gene ID: k141_53349_101
Type: pfam
Location: 107397 - 107939 (+)
Gene ID: k141_53349_102
Type: CAZyme
Location: 107945 - 108937 (+)
Gene ID: k141_53349_103
Type: CAZyme
Location: 108941 - 109912 (+)
Gene ID: k141_53349_104
Type: pfam
Location: 109925 - 111013 (+)
Gene ID: k141_53349_105
Type: CAZyme
Location: 111025 - 111981 (+)
Gene ID: k141_53349_106
Type: pfam
Location: 111947 - 113116 (+)
Gene ID: k141_53349_107
Type: CAZyme
Location: 113121 - 114125 (+)
Gene ID: k141_53349_108
Type: CAZyme
Location: 114112 - 115086 (+)
Gene ID: k141_53349_109
Type: pfam
Location: 115096 - 116616 (+)
Gene ID: k141_53349_110
Type: CAZyme
Location: 116638 - 117729 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_53349_89 vegan > omnivore 1.38124 0.00305
k141_53349_104 vegan > omnivore 1.35260 0.00305
k141_53349_107 vegan > omnivore 1.25752 0.00305

🧭 Explore Read Mapping of CGC

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