Cluster: SW017_31_CGC14
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 4
- Substrate:
- Genome ID: SW017_31
- CGC Family ID: CGCFAM_05618
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_28517 | k141_28517_19 | 15852 | 16349 | + | 4.A.1.2.2 |
| TC | k141_28517 | k141_28517_20 | 16432 | 17898 | + | 4.A.1.1.7 |
| CAZyme | k141_28517 | k141_28517_21 | 18282 | 19394 | + | CE9 |
| CAZyme | k141_28517 | k141_28517_22 | 19509 | 20282 | + | CE4 |
| pfam | k141_28517 | k141_28517_23 | 20279 | 20398 | + | ABC_tran |
| TC | k141_28517 | k141_28517_24 | 20504 | 20755 | + | 3.A.1.26.9 |
| TC | k141_28517 | k141_28517_25 | 20826 | 21185 | + | 3.A.1.32.2 |
| pfam | k141_28517 | k141_28517_26 | 21523 | 23640 | + | Gln-synt_C | GSIII_N | Gln-synt_C-ter |
| CAZyme | k141_28517 | k141_28517_27 | 23807 | 24577 | + | CE4 |
| pfam | k141_28517 | k141_28517_28 | 24635 | 25237 | + | MMR_HSR1 | FeoB_N |
| TF | k141_28517 | k141_28517_29 | 25238 | 25771 | - | 0041905 |
| TC | k141_28517 | k141_28517_30 | 25894 | 26517 | + | 9.A.11.1.1 |
| TC | k141_28517 | k141_28517_31 | 26504 | 26920 | + | 9.A.11.1.1 |
| TC | k141_28517 | k141_28517_32 | 26946 | 27410 | + | 9.A.11.1.1 |
| TC | k141_28517 | k141_28517_33 | 27407 | 28423 | + | 9.A.11.1.1 |
| pfam | k141_28517 | k141_28517_34 | 28423 | 28779 | + | SpoVAC_SpoVAEB |
| CAZyme | k141_28517 | k141_28517_35 | 28828 | 31365 | - | GT51 |
Gene ID: k141_28517_19
Type: TC
Location: 15852 - 16349 (+)
Type: TC
Location: 15852 - 16349 (+)
Gene ID: k141_28517_20
Type: TC
Location: 16432 - 17898 (+)
Type: TC
Location: 16432 - 17898 (+)
Gene ID: k141_28517_21
Type: CAZyme
Location: 18282 - 19394 (+)
Type: CAZyme
Location: 18282 - 19394 (+)
Gene ID: k141_28517_22
Type: CAZyme
Location: 19509 - 20282 (+)
Type: CAZyme
Location: 19509 - 20282 (+)
Gene ID: k141_28517_23
Type: pfam
Location: 20279 - 20398 (+)
Type: pfam
Location: 20279 - 20398 (+)
Gene ID: k141_28517_24
Type: TC
Location: 20504 - 20755 (+)
Type: TC
Location: 20504 - 20755 (+)
Gene ID: k141_28517_25
Type: TC
Location: 20826 - 21185 (+)
Type: TC
Location: 20826 - 21185 (+)
Gene ID: k141_28517_26
Type: pfam
Location: 21523 - 23640 (+)
Type: pfam
Location: 21523 - 23640 (+)
Gene ID: k141_28517_27
Type: CAZyme
Location: 23807 - 24577 (+)
Type: CAZyme
Location: 23807 - 24577 (+)
Gene ID: k141_28517_28
Type: pfam
Location: 24635 - 25237 (+)
Type: pfam
Location: 24635 - 25237 (+)
Gene ID: k141_28517_29
Type: TF
Location: 25238 - 25771 (-)
Type: TF
Location: 25238 - 25771 (-)
Gene ID: k141_28517_30
Type: TC
Location: 25894 - 26517 (+)
Type: TC
Location: 25894 - 26517 (+)
Gene ID: k141_28517_31
Type: TC
Location: 26504 - 26920 (+)
Type: TC
Location: 26504 - 26920 (+)
Gene ID: k141_28517_32
Type: TC
Location: 26946 - 27410 (+)
Type: TC
Location: 26946 - 27410 (+)
Gene ID: k141_28517_33
Type: TC
Location: 27407 - 28423 (+)
Type: TC
Location: 27407 - 28423 (+)
Gene ID: k141_28517_34
Type: pfam
Location: 28423 - 28779 (+)
Type: pfam
Location: 28423 - 28779 (+)
Gene ID: k141_28517_35
Type: CAZyme
Location: 28828 - 31365 (-)
Type: CAZyme
Location: 28828 - 31365 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes amylophilus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_28517_21 | vegan > omnivore | 1.28185 | 0.00305 |
| k141_28517_22 | vegan > omnivore | 1.70489 | 0.00305 |
| k141_28517_23 | vegan > omnivore | 1.13619 | 0.00305 |
| k141_28517_24 | vegan > omnivore | 1.86699 | 0.00305 |
| k141_28517_30 | vegan > omnivore | 1.51759 | 0.00305 |
| k141_28517_32 | vegan > omnivore | 1.21109 | 0.00305 |