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Cluster: SW017_31_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_40934 k141_40934_59 60691 63315 - 4.A.2.1.17
CAZyme k141_40934 k141_40934_60 63692 65158 - GH1
TC k141_40934 k141_40934_61 65180 67063 - 4.A.1.2.11
pfam k141_40934 k141_40934_62 67205 68050 - PRD | PRD | CAT_RBD
pfam k141_40934 k141_40934_63 68226 68936 - Peptidase_C39_2
TC k141_40934 k141_40934_64 69107 70513 - 2.A.25.1.3
pfam k141_40934 k141_40934_65 70644 71510 - PS_Dcarbxylase
pfam k141_40934 k141_40934_66 71530 72141 - CDP-OH_P_transf
TC k141_40934 k141_40934_67 72154 73179 - 4.D.2.1.5
pfam k141_40934 k141_40934_68 73185 73913 - PAP2_3
TC k141_40934 k141_40934_69 74074 77751 - 2.A.6.3.6
STP k141_40934 k141_40934_70 77966 79417 - CBS | CBS
TC k141_40934 k141_40934_71 79688 80056 - 4.A.4.1.2
Gene ID: k141_40934_59
Type: TC
Location: 60691 - 63315 (-)
Gene ID: k141_40934_60
Type: CAZyme
Location: 63692 - 65158 (-)
Gene ID: k141_40934_61
Type: TC
Location: 65180 - 67063 (-)
Gene ID: k141_40934_62
Type: pfam
Location: 67205 - 68050 (-)
Gene ID: k141_40934_63
Type: pfam
Location: 68226 - 68936 (-)
Gene ID: k141_40934_64
Type: TC
Location: 69107 - 70513 (-)
Gene ID: k141_40934_65
Type: pfam
Location: 70644 - 71510 (-)
Gene ID: k141_40934_66
Type: pfam
Location: 71530 - 72141 (-)
Gene ID: k141_40934_67
Type: TC
Location: 72154 - 73179 (-)
Gene ID: k141_40934_68
Type: pfam
Location: 73185 - 73913 (-)
Gene ID: k141_40934_69
Type: TC
Location: 74074 - 77751 (-)
Gene ID: k141_40934_70
Type: STP
Location: 77966 - 79417 (-)
Gene ID: k141_40934_71
Type: TC
Location: 79688 - 80056 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_40934_69 vegan > omnivore 1.28370 0.00305

🧭 Explore Read Mapping of CGC

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