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Cluster: SW017_31_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_71381 k141_71381_182 184455 186977 + GT4
NULL(UNKNOWN) k141_71381 k141_71381_183 186994 188760 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_71381 k141_71381_184 188842 189618 + 3.A.1.103.1
TC k141_71381 k141_71381_185 189628 190368 + 3.A.1.103.5
pfam k141_71381 k141_71381_186 190394 190810 + CTP_transf_like
pfam k141_71381 k141_71381_187 190817 191995 + Glyphos_transf
CAZyme k141_71381 k141_71381_188 192025 192960 + GT2
pfam k141_71381 k141_71381_189 192970 194139 + Glyphos_transf
pfam k141_71381 k141_71381_190 194198 195226 - LytR_cpsA_psr
TC k141_71381 k141_71381_191 195282 196712 - 9.B.18.1.1
Gene ID: k141_71381_182
Type: CAZyme
Location: 184455 - 186977 (+)
Gene ID: k141_71381_183
Type:
Location: 186994 - 188760 (+)
Gene ID: k141_71381_184
Type: TC
Location: 188842 - 189618 (+)
Gene ID: k141_71381_185
Type: TC
Location: 189628 - 190368 (+)
Gene ID: k141_71381_186
Type: pfam
Location: 190394 - 190810 (+)
Gene ID: k141_71381_187
Type: pfam
Location: 190817 - 191995 (+)
Gene ID: k141_71381_188
Type: CAZyme
Location: 192025 - 192960 (+)
Gene ID: k141_71381_189
Type: pfam
Location: 192970 - 194139 (+)
Gene ID: k141_71381_190
Type: pfam
Location: 194198 - 195226 (-)
Gene ID: k141_71381_191
Type: TC
Location: 195282 - 196712 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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