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Cluster: SW017_31_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_71381 k141_71381_143 144721 146154 + GH77
TC k141_71381 k141_71381_144 146355 147362 + 3.A.1.34.1
TC k141_71381 k141_71381_145 147460 148353 + 3.A.1.34.1
TC k141_71381 k141_71381_146 148370 149164 + 3.A.1.34.1
Gene ID: k141_71381_143
Type: CAZyme
Location: 144721 - 146154 (+)
Gene ID: k141_71381_144
Type: TC
Location: 146355 - 147362 (+)
Gene ID: k141_71381_145
Type: TC
Location: 147460 - 148353 (+)
Gene ID: k141_71381_146
Type: TC
Location: 148370 - 149164 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_71381_145 vegan > omnivore 1.06524 0.00305

🧭 Explore Read Mapping of CGC

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