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Cluster: SW017_31_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_9288 k141_9288_19 15569 18223 - 9.B.144.1.5
CAZyme k141_9288 k141_9288_20 18186 18932 - GT2
pfam k141_9288 k141_9288_21 19136 20470 + ELFV_dehydrog | ELFV_dehydrog_N
TC k141_9288 k141_9288_22 20580 21911 - 2.A.66.1.33
Gene ID: k141_9288_19
Type: TC
Location: 15569 - 18223 (-)
Gene ID: k141_9288_20
Type: CAZyme
Location: 18186 - 18932 (-)
Gene ID: k141_9288_21
Type: pfam
Location: 19136 - 20470 (+)
Gene ID: k141_9288_22
Type: TC
Location: 20580 - 21911 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_9288_20 vegan > omnivore 1.55218 0.00305

🧭 Explore Read Mapping of CGC

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