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Cluster: SW014_11_sub_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_75856 k141_75856_183 219383 220246 + 2.A.115.1.5
pfam k141_75856 k141_75856_184 220358 221539 - Aldo_ket_red | Fer4_8 | Fer4_9 | Fer4_10 | Fer4_17
pfam k141_75856 k141_75856_185 221592 222725 - ALGX
TC k141_75856 k141_75856_186 222740 224212 - 2.A.50.2.1
pfam k141_75856 k141_75856_187 224457 225842 + Sigma54_AID | Sigma54_DBD | Sigma54_CBD
CAZyme k141_75856 k141_75856_188 226612 228780 - GH13_11
pfam k141_75856 k141_75856_189 228995 229717 - Amidase_3
pfam k141_75856 k141_75856_190 229783 231243 - Metallophos | CNP_C_terminal
CAZyme k141_75856 k141_75856_191 231265 232947 - GH18
Gene ID: k141_75856_183
Type: TC
Location: 219383 - 220246 (+)
Gene ID: k141_75856_184
Type: pfam
Location: 220358 - 221539 (-)
Gene ID: k141_75856_185
Type: pfam
Location: 221592 - 222725 (-)
Gene ID: k141_75856_186
Type: TC
Location: 222740 - 224212 (-)
Gene ID: k141_75856_187
Type: pfam
Location: 224457 - 225842 (+)
Gene ID: k141_75856_188
Type: CAZyme
Location: 226612 - 228780 (-)
Gene ID: k141_75856_189
Type: pfam
Location: 228995 - 229717 (-)
Gene ID: k141_75856_190
Type: pfam
Location: 229783 - 231243 (-)
Gene ID: k141_75856_191
Type: CAZyme
Location: 231265 - 232947 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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